Ab initio and semiempirical methods for molecular dynamics simulations based on general Hartree--Fock theory

نویسنده

  • Sharon Hammes-Schiffer
چکیده

We present two new methods for molecular dynamics simulations based on general HartreeFock (GHF) theory. The first method involves approximating ab initio STO-3G matrix elements with fitting functions to enable faster computation of the energy and forces for molecular dynamics simulations. The implementation of this method includes a frozen-core approximation. The second method involves developing semiempirical potentials by reparametrizing the fitting functions obtained in the first method to fit experimental data. This second method enables us to reproduce experimental quantities with only the computational effort of an STO-3G calculation. We successfully applied both of these methods in conjunction with the Car-Parrinello ab initio molecular dynamics method to the geometry optimization of lithium clusters, cationic and neutral, of up to five atoms.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

NMR spectra of Azobenzene-bridged calix [8] arene complexes by ab initio hartree-fock calculations as nanostructure compound

Calix[8]arenes of conformational rigid were isolated. The NMR parameters of the structure of calix[8]arenes have been compared. The study of organic structures to form nanoporous materials is well-known in chemistry phenomena to find the crystal form of calix[8]arene as supramolecule. Investigated and compared hydrogen bonding, oxygen and nitrogen atoms effect on calix[8]arene and its complexes...

متن کامل

NMR spectra of Azobenzene-bridged calix [8] arene complexes by ab initio hartree-fock calculations as nanostructure compound

Calix[8]arenes of conformational rigid were isolated. The NMR parameters of the structure of calix[8]arenes have been compared. The study of organic structures to form nanoporous materials is well-known in chemistry phenomena to find the crystal form of calix[8]arene as supramolecule. Investigated and compared hydrogen bonding, oxygen and nitrogen atoms effect on calix[8]arene and its complexes...

متن کامل

An Ab initio and chemical shielding tensors calculations for Nucleotide 5’-Monophosphates in the Gas phase

Structural and magnetic properties of purine and pyrimidine nucleotides (CMP, UMP, dTMP, AMP, GMP, IMP) were studied at different levels of ab initio molecular orbital theory. These calculations were performed at the hartree-fock level and density functional B3LYP methods. Geometries were fully optimized by following Cs symmetry restrictions. The standard 6-31G** basis set which includes polari...

متن کامل

Ab initio molecular simulations with numeric atom-centered orbitals

a r t i c l e i n f o a b s t r a c t Keywords: Ab initio molecular simulations Density-functional theory Atom-centered basis functions Hartree–Fock MP2 O(N) DFT GW self-energy We describe a complete set of algorithms for ab initio molecular simulations based on numerically tabulated atom-centered orbitals (NAOs) to capture a wide range of molecular and materials properties from quantum-mechani...

متن کامل

Charge Transfer and Polarization in Solvated Proteins from Ab Initio Molecular Dynamics

I has been long recognized that water plays an important role in protein structure and dynamics. Water on the protein surface, often referred to as biological water, is an essential element of protein interactions and enzyme function. Some water molecules reside in the same location near the protein surface for a long time compared with the typical relaxation time under bulk conditions. These w...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 1999